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Run pyCompile within atlas_build_run.sh

Frank Winklmeier requested to merge fwinkl/atlasexternals:pyCompile_env into master

Run the python compilation within atlas_build_run.sh to ensure we are using the correct Python version in case the external project does not provide one in the environment (or we are not using an external project).

Required for the DetCommon project (athena!41084 (merged)).

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