Incremental updates from MWGR#3

Description

This issue includes the various developments and bugfixes required to run during the MWGR-3 in both miniDAQ and global. Only features that do compile and provided improvements in the configuration process have been kept.

Here is the list of implemented changes:

1. Update the RPM package to match the latest updates
2. Bump the RPM package minor version to allow installation via the dropbox mechanism in the .cms network
3. Wait for the TTC clock alignment procedure to complete
4. Open the LMDB database only once per RPC connection (see #69 (closed))
5. Wait for the PLL to lock during recovery
6. Include basic monitoring (!40 (merged), !50 (merged), !41 (merged)) - will probably be removed from final MR
7. Update the RPM package to match the latest developments and the versioning scheme
8. Use tito to build and manage the RPM packages (both manually by the developers and by the CI; see #109 (closed))
9. Update the AMC13 repository to the "GCC8 version" (fixes the IPbus address table for uHAL 2.7)

Closes #69 (closed) and #109 (closed).

How Has This Been Tested?

Tested during miniDAQ and global runs at p5.

Types of changes

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

• My code follows the code style of this project.
• My change requires a change to the documentation.
• I have updated the documentation accordingly.
• I have read the CONTRIBUTING document.
• I have added tests to cover my changes.
• All new and existing tests passed.

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• 5ef4981f - Open the LMDB database only once per RPC connection

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added 9 commits

• 5ef4981f...38a9b98c - 5 commits from branch develop
• ef63ccea - Update the RPM package
• 9a6e97af - Wait for the TTC clock alignment procedure to complete
• 7b435f73 - Open the LMDB database only once per RPC connection
• 3a110b93 - Bump RPM package version

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added 31 commits

• 25198436 - Add json file of monitorables and change gemdaqmonitor to read it in
• 5fde3ed9 - Remove direct refs to monVars by using json (need to fix labels)
• 89bc900b - Add label.json to handle html labels (removes hard coded funcs)
• e6153c76 - Clean up logic, especially to assist in displaying VFAT specific var
• 682e6084 - Clean json files by OH1 -> OH${OH}, remove \", add 16bit label
• 5e338318 - Minor changes to fix issues raised in MR !5 (closed)
• 4eee6dd8 - Change many variables to snake case and add doxygen doc
• 3877d5d9 - Fix formatting, change for(auto) -> for(const auto&) + more
• e0faadd5 - Switch to nlohmann::json for writing out labels
• 7ed6433e - anonymize expand func and add check on json file (if exists)
• f2d408f5 - Add logic for GBT monitoring, but remove some groups (don't work)
• 131bcd1c - Remove ORing (lists all VFAT/GBT info now) for testing at P5
• 12b5a1e3 - Add mon groups OH_SCA_TEMP and OH_SCA_VOLTAGE which get from sca.h
• 005d9b47 - Change # of GBT's to 3 to match actual GE11
• 5fc842cd - Add GBT adn VFAT functionality and fix others (not sca)
• 5ea48b89 - Add logfile variables to xml to be handed to DaqMonitor
• 68b42597 - Add json file of monitorables and change gemdaqmonitor to read it in
• 93bace26 - Remove direct refs to monVars by using json (need to fix labels)
• c99549a2 - Add label.json to handle html labels (removes hard coded funcs)
• bc9a5218 - Clean up logic, especially to assist in displaying VFAT specific var
• b6cebe9a - Clean json files by OH1 -> OH${OH}, remove \", add 16bit label
• e9353d75 - Minor changes to fix issues raised in MR !5 (closed)
• 1eba6cba - Change many variables to snake case and add doxygen doc
• 711fb1b7 - Fix formatting, change for(auto) -> for(const auto&) + more
• d33920c7 - Switch to nlohmann::json for writing out labels
• 9f5b87ef - anonymize expand func and add check on json file (if exists)
• 3296d79f - Wait for the PLL to lock during recovery
• 954613b0 - Merge remote-tracking branch 'upstream/feature/optional_monitor_logs' into...
• 9a1251fd - Merge remote-tracking branch 'upstream/feature/daqmon-vars-in-jsonfile' into...
• badca247 - Merge remote-tracking branch 'upstream/feature/gbt_status' into feature/mwgr-3-incremental-updates
• 06dccd3f - Bump RPM package version

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• 06dccd3f...56a51ccd - 2 commits from branch develop
• 8b5333b4 - Wait for the TTC clock alignment procedure to complete
• a5a10816 - Open the LMDB database only once per RPC connection
• 71bac60d - Wait for the PLL to lock during recovery
• c6e910fe - Update the RPM package
• 36037bf5 - Initialized to use tito.
• 391fca98 - Automatic commit of package [cmsgemos] release [0.0-2].
• 45b8610c - Build RPM packages in the CI with tito

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unmarked as a Work In Progress

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added prioritycritical label

assigned to @lmoureau, @cgalloni, and @dteague

added 1 commit

• 72eacb95 - Build RPM packages in the CI with tito

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Is this ready for review? The WIP tag was dropped, but commits are still being added.

added 1 commit

• 110514c0 - Update the AMC13 Yum repository to the "GCC8 version"

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• Please split clang-format changes out of a5a10816
• Add instructions for a local RPM build with tito to the DEVELOPERS.md, and discard the existing instructions in the spec file

added 7 commits

• 3c4b2bbd - Open the LMDB database only once per RPC connection
• 7e9c8519 - Wait for the PLL to lock during recovery
• 309ea99f - Update the RPM package
• b9c17311 - Initialized to use tito.
• 46a26560 - Automatic commit of package [cmsgemos] release [0.0-2].
• 8aa15f09 - Build RPM packages in the CI with tito
• 4d9cfdd7 - Add instruction to locally build RPM with tito

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changed the description

All comments addressed, and AMC13 repository update removed from this MR since it might take longer to be fixed.