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Fix SGE job submission

Mykhailo Dalchenko requested to merge bugfix/sge-submission into master

Description

  • Update the way of job submission through subprocess
  • Add CAMK-compatible configuration for SGE job submission
  • Misc logging and comments update

Related Issue

#13 (closed)

How Has This Been Tested?

Tested on CAMK cluster

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • My code follows the code style of this project.
  • My change requires a change to the documentation.
  • I have updated the documentation accordingly.
  • I have read the CONTRIBUTING document.
  • I have added tests to cover my changes.
  • All new and existing tests passed.

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