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Unify time alignment in the SiPM tool and make it more flexible

Louis Henry requested to merge lohenry-refineTimeAlignment into master


Time alignment in the SciFi simulation is currently done only station-wide, which does not correspond to reality. Furthermore, it makes it impossible to fiddle with time alignment in MC to study effects of misalignments.

This MR is probably a temporary fix, as the final fix should imply proper use of Conditions.

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